How did you digitalize the super8 film? Might a dedicated device for that purpose include precisely the odd-even frame adjustment feature?
Anyway, with the advent of 3D video, there may be more than one reason to need to apply different effects to even and odd frames. If a 2D video file could be imported as though it were 3D, perhaps that would allow the sort of adjustments you want. I don't know if the existing consumer NLEs that claim 3D support (Roxio, Magix) would allow that. High end tools (CS5, Vegas Pro) presumably might. I suppose it depends on whether the distortion or need for optimization is great enough to warrant the investment.
Somewhere there must be a blog or forum for super8 digitalization that elucidates the best tools or tricks.
Please don't take offense. It would be fine if Studio had or acquired the feature you ask. But you'll likely get a faster solution by trying other means.